Protein Info for Pf6N2E2_2858 in Pseudomonas fluorescens FW300-N2E2

Annotation: Phosphohydrolase (MutT/nudix family protein)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 202 TIGR04025: pyridoxamine 5'-phosphate oxidase, FMN-binding family" amino acids 7 to 202 (196 residues), 261.9 bits, see alignment E=1.2e-82 PF01243: Putative_PNPOx" amino acids 29 to 120 (92 residues), 59 bits, see alignment E=2.1e-20

Best Hits

KEGG orthology group: K07006, (no description) (inferred from 98% identity to pba:PSEBR_a1243)

Predicted SEED Role

"Phosphohydrolase (MutT/nudix family protein)"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165ZWD9 at UniProt or InterPro

Protein Sequence (202 amino acids)

>Pf6N2E2_2858 Phosphohydrolase (MutT/nudix family protein) (Pseudomonas fluorescens FW300-N2E2)
MMLTSIEQLEALYGLPHERAVRKQIPFLNEDYQAMVRASPLVVIGSAGPDGLDSSPRGDV
PGFVQVLDEHTLALPDRLGNNRIDTLRNVLHDPRVSLLFLIPGIGETLRVNGTARISADP
ALLERFAVNGKPARTVLLVTVEAAFFHCSKAIVRSDLWNPARHLERSALPSAGAIHKRLN
GGQFDAETYDREAPARVQASLY