Protein Info for Pf6N2E2_2544 in Pseudomonas fluorescens FW300-N2E2

Annotation: Deblocking aminopeptidase (EC 3.4.11.-) @ Cyanophycinase 2 (EC 3.4.15.6)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 396 TIGR03106: hydrolase, peptidase M42 family" amino acids 9 to 350 (342 residues), 582.6 bits, see alignment E=1.1e-179 PF05343: Peptidase_M42" amino acids 54 to 342 (289 residues), 242.8 bits, see alignment E=4.3e-76 PF01546: Peptidase_M20" amino acids 180 to 286 (107 residues), 31.1 bits, see alignment E=2.2e-11

Best Hits

KEGG orthology group: None (inferred from 99% identity to pba:PSEBR_a1525)

Predicted SEED Role

"Deblocking aminopeptidase (EC 3.4.11.-) @ Cyanophycinase 2 (EC 3.4.15.6)" (EC 3.4.11.-, EC 3.4.15.6)

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.4.11.- or 3.4.15.6

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A159ZVV5 at UniProt or InterPro

Protein Sequence (396 amino acids)

>Pf6N2E2_2544 Deblocking aminopeptidase (EC 3.4.11.-) @ Cyanophycinase 2 (EC 3.4.15.6) (Pseudomonas fluorescens FW300-N2E2)
MISKIPEPDLEYLQKVLLEMLAIPSPTGFTDTIVRYVAERLEELGIAFEMTRRGTIRATL
KGRKSSPDRAVSAHLDTIGASVRAIKDNGRLTLAPVGCWSSRFAEGSRVSLFTDTGVIRG
SVLPLMASGHAFNTAVDELPISWDHIELRLDAYCATRADCETLGVGIGDYVAFDPLPEFT
ESGHISARHLDDKAGVAALLAALKAIVDSGEELLIDCHPLFTITEETGSGAAAALPWDVS
EFVGIDIAPVAPGQHSSEHSVSVAMQDSGGPYDYHLSRHLLKLAKENEVPARRDLFRYYF
SDAHSAITAGHDIRTALLAFGCDATHGYERTHIDSLAALSRLLGAYILSPPVFASDAQPA
QGSLDRFSHQIEHDTQMESDTRVPSVDSLVGQRSDS