Protein Info for Pf6N2E2_2486 in Pseudomonas fluorescens FW300-N2E2

Annotation: TesB-like acyl-CoA thioesterase 1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 265 PF13622: 4HBT_3" amino acids 20 to 104 (85 residues), 69.9 bits, see alignment E=1.7e-23 PF20789: 4HBT_3C" amino acids 125 to 263 (139 residues), 103.3 bits, see alignment E=1.3e-33

Best Hits

KEGG orthology group: None (inferred from 98% identity to pba:PSEBR_a1594)

Predicted SEED Role

"TesB-like acyl-CoA thioesterase 1"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A159ZYH7 at UniProt or InterPro

Protein Sequence (265 amino acids)

>Pf6N2E2_2486 TesB-like acyl-CoA thioesterase 1 (Pseudomonas fluorescens FW300-N2E2)
MRFSDLIDAVRRQPGAVSIAPEWGQGRASFGGLVAALQYEAMRAQVPADRPVRSLAITFV
GPVEPDVPVSFEVDVLREGKAVSQVLARAVQNGQVVTVVQGSFGASRSSVVAVQADPAPE
FKSVEQCQELPYVKGATPEFMRHLAMRWSVGGLPFSGNKSRSMGGWVRLRGDVQEEPLNE
SHILALVDAWPPALLPHLSQMAPGSTLTWTIEFVQPLLELTTLDWCKYLAEIEHAQDGYG
HVAAKFWSADGRLIALSRQTVTIFG