Protein Info for Pf6N2E2_2388 in Pseudomonas fluorescens FW300-N2E2

Annotation: Esterase/lipase/thioesterase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 329 PF00561: Abhydrolase_1" amino acids 57 to 169 (113 residues), 48.3 bits, see alignment E=1.7e-16 PF12697: Abhydrolase_6" amino acids 58 to 271 (214 residues), 47.7 bits, see alignment E=4.9e-16 PF12146: Hydrolase_4" amino acids 77 to 179 (103 residues), 36.3 bits, see alignment E=5.9e-13

Best Hits

KEGG orthology group: None (inferred from 98% identity to pba:PSEBR_a1678)

Predicted SEED Role

"Esterase/lipase/thioesterase family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A159ZYA4 at UniProt or InterPro

Protein Sequence (329 amino acids)

>Pf6N2E2_2388 Esterase/lipase/thioesterase family protein (Pseudomonas fluorescens FW300-N2E2)
MQSSSNLFPVALISAERRGDLSEDVYRLKPGNSPDASVELAVTRLGMADACETRGVPVIL
LHGSFSNRRFWYSPKGLGLGAYLTRLGFDVWIPEMRGHGLSQRNQGYRNNRVADYARYDL
PAIGAFVREQSGQVPHWIGHSLGGITLAAALGGHYLGKPAVASAAFFGTQVSRTYWPLKI
PPVEWSGRFILKRFAQLSGSRLKRGPEDEPIGLALESMRWYGLFGRFGDAEKNWWAGLAD
VQLPVLAVSAAGDHQDPTWACRKLFDQIGSEHKQFVCLGRGQGFTEDFGHVEMLVSKAAH
LEVWPLVVRWLKDQQAPLLAEQPQLAEAV