Protein Info for Pf6N2E2_2160 in Pseudomonas fluorescens FW300-N2E2

Annotation: Uncharacterized protein conserved in bacteria, NMA0228-like

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 238 PF05114: MbnB_TglH_ChrH" amino acids 3 to 231 (229 residues), 277.3 bits, see alignment E=5.7e-87

Best Hits

Swiss-Prot: 47% identical to Y3513_CHRVO: UPF0276 protein CV_3513 (CV_3513) from Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)

KEGG orthology group: K09930, hypothetical protein (inferred from 52% identity to reu:Reut_A2688)

Predicted SEED Role

"Uncharacterized protein conserved in bacteria, NMA0228-like"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A159ZYX1 at UniProt or InterPro

Protein Sequence (238 amino acids)

>Pf6N2E2_2160 Uncharacterized protein conserved in bacteria, NMA0228-like (Pseudomonas fluorescens FW300-N2E2)
LGPGGKDLHILRRLAQRYPISLHGVGLGIGSVHGFSSAHVERIRRLAADVDPFLVSEHLS
WGAIEGRCLNDLLPLPLVEASLDLVCDRVDQVQDTLGQQLLLENISTSLRYHGDTLGEAQ
FLAEVVARTGSAVLLDLNNLHVNQCNHGECALAALQALDKSTVREFHLAGHSQEEGLLID
DHGSAVAEPVWSLYRNALRRFGPVPVLVEWDTRLPPLGELLDQVEIARAIAREVLHDT