Protein Info for Pf6N2E2_208 in Pseudomonas fluorescens FW300-N2E2

Annotation: Glycosyl transferase, group 2 family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 815 PF13692: Glyco_trans_1_4" amino acids 410 to 524 (115 residues), 31.2 bits, see alignment E=3.7e-11 PF13641: Glyco_tranf_2_3" amino acids 563 to 780 (218 residues), 75.5 bits, see alignment E=8.6e-25 PF00535: Glycos_transf_2" amino acids 566 to 723 (158 residues), 106.9 bits, see alignment E=1.7e-34

Best Hits

KEGG orthology group: None (inferred from 91% identity to pba:PSEBR_a3664)

Predicted SEED Role

"Glycosyl transferase, group 2 family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165YMZ7 at UniProt or InterPro

Protein Sequence (815 amino acids)

>Pf6N2E2_208 Glycosyl transferase, group 2 family protein (Pseudomonas fluorescens FW300-N2E2)
MDQINRLVDCIDKLTRSTQSRSIEALQLVKEIENRDRLIKQLNLDSKALRTRLSLQEGKT
GRLRERLRLAEQRLKDAEALIQTKEKEAVVFSDWAVDLRAQLAAKQAELFKLSDWGNAIE
RAPLRYSIRKQLYKLSRRVYAWLPLTAQQKSKLARRLRNWLKPGKATPGESSPDAGFALQ
TLPPPVNVAVPSSLGQPMILMFGVIDWHFRIQRPQNLAKELARAGQTTFYISNNFIDDEA
PGFQAEPLEGSHRLFQIRFKVRGAPAIYHAPPSAAVIRQLCEGLAMLLEAANVDAADCIV
QHAYWFPLARRVPNATLVYDCMDHHEGFGNVAQELLDLEIALMRRADLLVATSDWIEQHG
KRENRNVEVIRNACEFSFFSRRPDRVYRDPANRKIIGYYGVIAEWFDLDLVKRVAQSFPQ
HLILLIGSDIVQAKKHFKACPNVILEGEVPYTALPYYLHAMDVCLLPFKVMPLTLATNPV
KVYEYLSAGKPVVSVKLPELSQFGKLVWAVEEPTEFISTLRAVLGALPEASATLEARQSF
ARGQTWQHRAASLRDAIAALPQPKVSVVVLTYNNLELTKACLDSLLTQSQYPNLEIIVVD
NHSSDQTPAYLTAWAKGHPDRIVILNPDNKGFAAGNNQGLAAASGDYLVILNNDTVVTAG
WIKGLIRHLQDHKEIGIIGPITNNIGNEAKVSTRYGRIEDMPAEAAQMSRARMGEWFEIN
TLAFFCVMFPRSTYEQIGGLCEEYGLGFFEDDDYCRRVQRRGMRAACAEDVFVHHHLSAS
FNTLGARKKQALFEKNRAIYESKWGSWVPHTYRDV