Protein Info for Pf6N2E2_2057 in Pseudomonas fluorescens FW300-N2E2

Annotation: Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipi n synthases and related enzymes

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 548 PF13091: PLDc_2" amino acids 192 to 319 (128 residues), 52.2 bits, see alignment E=2.7e-18

Best Hits

KEGG orthology group: None (inferred from 93% identity to pba:PSEBR_a1957)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A159ZWX3 at UniProt or InterPro

Protein Sequence (548 amino acids)

>Pf6N2E2_2057 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipi n synthases and related enzymes (Pseudomonas fluorescens FW300-N2E2)
MRVLVTNAQDDFRVKAYAGTNGVLLAMDLAEPRRKGLLGFAIEKQQGDKPWLFLFNSLTF
PDKAHTFPQFHATPSDKAPLQKFRWADYAVNPGVTIHYRVHLAYGSPDAPQLGEFLAVTV
TSDDGQPTNQRVIFNRAVAASQAFQRKFPEVDALISANKNLSIDDWPDAPRRWLENGLLG
RLTGFIDRALDAHWALDVAIYEYELPVIVDAVNAAHARGAQVRVLYHAEPGDDTTLRNEA
NLEKLPAANKRGRVTHNIFHDKFIVLSKVDGGGALQPEAVLCGSTNFTANGVYRQANVVH
VLDDPRVSDGYRQVFEQIWAIPQDVGTTREWINQNNPMVPEEQLFIGFSPRTGEGDLDRF
VDIINAARKDLLFVTAFVLPDRILDAVLGQPNDDVLRYGLQNTKSRITGFHADRTAEFAA
TALLNTGLEGWLKENMKGQKGNLLVHTKAIVTDFTSDTPTIISGSHNLSAAASSGNDENY
LIIQGDTDLADRYGLELLRFYEHYRFRYFAKKLALKQVKPLAVDDSWSDDYYREGDLRML
SRVRFCGR