Protein Info for Pf6N2E2_1865 in Pseudomonas fluorescens FW300-N2E2

Annotation: Beta-carotene hydroxylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 296 transmembrane" amino acids 25 to 48 (24 residues), see Phobius details amino acids 51 to 72 (22 residues), see Phobius details amino acids 92 to 114 (23 residues), see Phobius details amino acids 134 to 153 (20 residues), see Phobius details amino acids 166 to 187 (22 residues), see Phobius details amino acids 193 to 213 (21 residues), see Phobius details PF00487: FA_desaturase" amino acids 58 to 284 (227 residues), 118.7 bits, see alignment E=1.9e-38

Best Hits

KEGG orthology group: None (inferred from 37% identity to npp:PP1Y_AT15905)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A159ZUK8 at UniProt or InterPro

Protein Sequence (296 amino acids)

>Pf6N2E2_1865 Beta-carotene hydroxylase (Pseudomonas fluorescens FW300-N2E2)
VTINALARFTVPLEKRAALEKLCRVPGASPMVLGLLIASTGGVIVADILAVLGYFNLGWT
CLLNTFLMYWQFTVAHDSIHRSAAKNQKLNDLFGHIGMATFAPQISLGIFRWAHIQHHRF
TNGPKDPDNWMHGPWWSLPARWSLLEIGYLLFIMKNRDPIAMRHLRGTLLNAAITVAIVA
ALTYLGYGMHVLLLWFIPSRLVFILVGCVFFWLPHVKDDVESEQDLTLATSMRLGHEWLL
TPLCQYHNYHLIHHLFPTMPAYQHVKAWQLLEPELRQRNLQIQHGFAIQPVIHLST