Protein Info for Pf6N2E2_1849 in Pseudomonas fluorescens FW300-N2E2

Annotation: FIG002188: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 454 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details PF07044: DUF1329" amino acids 83 to 422 (340 residues), 339.8 bits, see alignment E=1.2e-105

Best Hits

Predicted SEED Role

"FIG002188: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A159ZWG4 at UniProt or InterPro

Protein Sequence (454 amino acids)

>Pf6N2E2_1849 FIG002188: hypothetical protein (Pseudomonas fluorescens FW300-N2E2)
MKRSNLASVLALAVLAGAVQSAFASEAGQLGGAELTAFGAQRSGNADGSIPAYSDEPLSL
PACYDKDEPTNFCDPWNDKPIFTITPQNLSQYAERLTEGQKALFARYPEYKMNVYQTRRT
VRFPQTYQDNTRKNVDACKTANAGVSIEGCYAGLPFPLPKTGNEVIWNHQLQYSPPLQAN
ARSYLVDGSARRILLNALKVLESSEFLDTTDNGPKGSGAEFWRVRFFVYDPARRNGEQTL
ARYQVSGEQRAWQYLPGQRRVKLAPDLAYDTPSPVAGGITTMDQQRLILGKQDRYDFKYL
GVEEKLINYNNFAVYDYKACSEDKLFTKSFPNPECIRWELHRVRVVEATLKPGFRHLLPK
RRFYIDEDASGAGTADSYDVTGKLIRIDSMLTIPNYVYGYGLIPDNTLTFDLERGAYILP
SFTGFKGGRLRSDWQTPRSPPGPPKTWGRRVSVE