Protein Info for Pf6N2E2_167 in Pseudomonas fluorescens FW300-N2E2

Annotation: Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 342 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details PF01156: IU_nuc_hydro" amino acids 34 to 332 (299 residues), 308.4 bits, see alignment E=3.5e-96

Best Hits

KEGG orthology group: None (inferred from 99% identity to pba:PSEBR_a3705)

Predicted SEED Role

"Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)" in subsystem Purine conversions or Queuosine-Archaeosine Biosynthesis (EC 3.2.2.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.2.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165YLH5 at UniProt or InterPro

Protein Sequence (342 amino acids)

>Pf6N2E2_167 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) (Pseudomonas fluorescens FW300-N2E2)
MHRYAEKMHQLIRSLLLLSLITATSAQAAEKIDLIIDTDPGADDVVALLFALASPEELHI
RALTTVAGNVRLDKTSRNARLAREWAGREDVPVYAGAPKPLMRTPIYAENIHGKEGLSGV
TVHEPKKGLAEGNAVNYLIDTLKAAKPHSITIAMLGPQTNLALALVQEPDIVQGIKEVVI
MGGAHFNGGNITPVAEFNLFADPQAAEVVAKSGVKLTYLPLDVTHKILTSDARLKQIAAL
NNNASKLVGDILNEYVKGDMEHYGMTGGPVHDATVIAYLLKPQLFTGRSVNVVVDSREGP
TFGQTIVDWYDGLKAPKNAFWVENGDAQGFFDLLTERLARLK