Protein Info for Pf6N2E2_1636 in Pseudomonas fluorescens FW300-N2E2

Annotation: Ferrichrome-iron receptor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 737 signal peptide" amino acids 1 to 41 (41 residues), see Phobius details PF07715: Plug" amino acids 90 to 192 (103 residues), 80.6 bits, see alignment E=1.2e-26 TIGR01783: TonB-dependent siderophore receptor" amino acids 91 to 735 (645 residues), 379.7 bits, see alignment E=1.6e-117 PF00593: TonB_dep_Rec" amino acids 266 to 708 (443 residues), 205.5 bits, see alignment E=2.9e-64

Best Hits

KEGG orthology group: K02014, iron complex outermembrane recepter protein (inferred from 73% identity to pfv:Psefu_3170)

Predicted SEED Role

"Ferrichrome-iron receptor" in subsystem Iron acquisition in Vibrio or Transport of Iron

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A161H4R1 at UniProt or InterPro

Protein Sequence (737 amino acids)

>Pf6N2E2_1636 Ferrichrome-iron receptor (Pseudomonas fluorescens FW300-N2E2)
MLGKKTTVGTEKRYVMRHPAFHLSTLALALGSIFSAQAIAAQDETSDKGTTVQLGEININ
AAAPENPTGPVNGKVALRNTSATKTNAAITETPQSLSVVTADEMRDRKSDTLADALSYTP
GFTSQPSSFNRTSDRFRIRGFDVESATGGSLRDGLRLQNNSYDGVQEPFGLERVEVIRGA
ASVLYGQLSPGGFVNGVSKRPTEAPLHELGLQYGNHDRKQLTADFSGPLGDSETLSYRLT
MLKRDSDTQQDYINDDKTYIAPALTWRPNEDTSLTLLSFYQKSDTRFSAPLPYQLVKGVG
NGPFTIGRHDFIGEPDYDDMNGEMSAIGYEFEHRFDEHTRISNKLRYYEADVKWKYLQVR
TGAPVNTAATTGLLARQYSDRHERSRALASDTNVETRWNIGGVENTFLVGADTYDASYDS
HNFRGNAPSINIGDYNYGQPVVVDKDPSRDRGSQIDTLQTGIYLQDQIKFDDHWLLLLGG
RHDWADQDQRAFATGQKLDQSNEATTWRAGLVYQADNGLAPYISYSESFFPVAVAEAPGQ
KFDPTEGKQYEIGIRYQPPGSNTLLSAAVYELTQENVVKRDLAGENPQQIGEQRSRGLEL
EAKTDVTPQLSVIATYAYTDARITKSQIQSEVGQRSEDTPYHQAAIWADYNFALFGLPQL
KVGGGARYKGTTQASGIDSQMPAYTLFDAMASYQIDKNWDIALNANNVTNKKYTYCEFAI
CRYGDERELVTSVNFRW