Protein Info for Pf6N2E2_1624 in Pseudomonas fluorescens FW300-N2E2

Annotation: MbtH-like protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 25 50 71 PF03621: MbtH" amino acids 3 to 50 (48 residues), 81.8 bits, see alignment E=9.3e-28

Best Hits

Swiss-Prot: 52% identical to MBTH_MYCTU: Protein MbtH (mbtH) from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)

KEGG orthology group: K05375, MbtH protein (inferred from 63% identity to cti:RALTA_B1223)

MetaCyc: 52% identical to putative conserved protein (Mycobacterium tuberculosis H37Rv)
2.3.1.-

Predicted SEED Role

No annotation

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A159ZVF9 at UniProt or InterPro

Protein Sequence (71 amino acids)

>Pf6N2E2_1624 MbtH-like protein (Pseudomonas fluorescens FW300-N2E2)
MSLDSPDTRFLVVVNDEEQYSIWPDYRSVPNGWRTLDMKGSKQECLDYIEKVWTDMRPLS
LRQAMHVQGQG