Protein Info for Pf6N2E2_1532 in Pseudomonas fluorescens FW300-N2E2

Annotation: FIG003847: Oxidoreductase (flavoprotein)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 556 PF04273: BLH_phosphatase" amino acids 2 to 110 (109 residues), 93.9 bits, see alignment E=6.8e-31 TIGR01244: TIGR01244 family protein" amino acids 2 to 134 (133 residues), 117.9 bits, see alignment E=1.6e-38 PF07992: Pyr_redox_2" amino acids 151 to 263 (113 residues), 26.9 bits, see alignment E=3.2e-10

Best Hits

KEGG orthology group: None (inferred from 97% identity to pba:PSEBR_a2511)

Predicted SEED Role

"FIG003847: Oxidoreductase (flavoprotein)"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A159ZTP0 at UniProt or InterPro

Protein Sequence (556 amino acids)

>Pf6N2E2_1532 FIG003847: Oxidoreductase (flavoprotein) (Pseudomonas fluorescens FW300-N2E2)
MDIRHLASGLSISGQIQPEQMSEIKTSGFRAIICNRPDGEGSDQPLFADIQRAAQAMGIE
AHYLAAESGKVTDEQGVAFGKLFESLPKPVLAYCRSGMRSTTMWALSQAGQQPLPQIVEA
ARKAGFDMKGVIRRIANEGRTPVGVAEARHAVVIVGGGAAGIATASSLLAREPGLDIAII
DPADVHYYQPGWTLVGGGVFEAQQTAHTMGATIPRGVHWIKAAVAAFEPENDAIILDGCR
VVRYEQLIVCPGLKLDWHAIEGLPQTLGRNGVTSNYLYHLAPYTWEQVQQLRSGRAIFTQ
PPMPIKCAGAPQKAMYLCADHWKRQGVLGDIEIDFCSAGAVLFGVPDYVPALMEYVRAYE
IDLNFGSTLTSVDGPAQTATFSCVKADGSTHLVTHDFDLLHVVPPQVAPDFIRVSPLADG
AGWIDVDPDSLRHKTWANIHALGDATNTSNAKTAAAARKQAPVVAHNVLAAMGKAKGSAH
YDGYGSCPLTVERGKVVLAEFTYGGKLAPSFPSWLIDGIRPSRLAWLLKERILPPLYWKA
MLKGREWLAKPELADL