Protein Info for Pf6N2E2_15 in Pseudomonas fluorescens FW300-N2E2

Annotation: Pyoverdine biosynthesis related protein PvdP

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 532 signal peptide" amino acids 1 to 14 (14 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 93% identity to pba:PSEBR_a3911)

MetaCyc: 65% identical to ferribactin monooxygenase monomer (Pseudomonas aeruginosa PAO1)
1.14.18.-

Predicted SEED Role

"Pyoverdine biosynthesis related protein PvdP" in subsystem Siderophore Pyoverdine

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165YGP7 at UniProt or InterPro

Protein Sequence (532 amino acids)

>Pf6N2E2_15 Pyoverdine biosynthesis related protein PvdP (Pseudomonas fluorescens FW300-N2E2)
MAGLALTGAAVPAVYYGHRELTRPDPTITPGEASFDVADVAGQRRADTLRGIWTIRFTGR
DAGLDGLPQDDLQVFLDIGHKGRGLVGYLDTAERLRAGDEPRYRVLGDLAGTDPKQLSWR
LIGAQAPGGAPDYEFTMTLDEVWAGFGNAGSATLSGRVLRLDRPLGLLELDNQFIAHKQP
FPEARERTPLSPALLAWLVSPEHRLFHQLWHASRDKWHTLDEDKRNALRGIGWQPGPRDQ
ERDARGPRKDRNGSGIDFFFMHRHMLGTARSFQPLPSWPRFPLPQPELERDRLGFARYFD
NHDGTALPPTWLADGDDQYAQWVSDIKTAETYHSNFQVWESRYRDPRYLAKLTLGQFGSE
VELGLHDWLHMRWASVPRDPSNGYPVPFARDPDDFAQRWYAPENDFLGDPFSSHVNPVFW
AFHGWIDDRLEDWFRAHERFHPGEVSRLEVNGVPWFAPGRWVEIADPWLGPDTHGCSTTP
GLQAGRSVEMDPETMKLALRITFGSDDKKLSELFRRVPQRPWYARNLKSKPV