Protein Info for Pf6N2E2_1370 in Pseudomonas fluorescens FW300-N2E2

Annotation: Putative benzaldehyde dehydrogenase oxidoreductase protein (EC 1.2.1.28)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 490 PF00171: Aldedh" amino acids 23 to 479 (457 residues), 513.5 bits, see alignment E=2.2e-158

Best Hits

Swiss-Prot: 50% identical to XYLC_PSEPU: Benzaldehyde dehydrogenase [NAD(+)] (xylC) from Pseudomonas putida

KEGG orthology group: None (inferred from 98% identity to pba:PSEBR_a2680)

MetaCyc: 50% identical to benzaldehyde dehydrogenase monomer (Pseudomonas putida mt-2)
Benzaldehyde dehydrogenase (NAD(+)). [EC: 1.2.1.28]; 1.2.1.28 [EC: 1.2.1.28]; 1.2.1.28 [EC: 1.2.1.28]; 1.2.1.28 [EC: 1.2.1.28]

Predicted SEED Role

"Putative benzaldehyde dehydrogenase oxidoreductase protein (EC 1.2.1.28)" in subsystem Phenylpropanoid compound degradation (EC 1.2.1.28)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.2.1.28

Use Curated BLAST to search for 1.2.1.28

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A159ZUY3 at UniProt or InterPro

Protein Sequence (490 amino acids)

>Pf6N2E2_1370 Putative benzaldehyde dehydrogenase oxidoreductase protein (EC 1.2.1.28) (Pseudomonas fluorescens FW300-N2E2)
MSASKSHLLSQVIESECVFNGDWVPASGPLQSIIEPATGERLMRCATADSADIAKASRDA
ALAQPGWAALGPRQRAAIFRKAAEVAEHSFNELALYVARETGAALFKGQHEVREAIVLLH
QAAGLLSQAHGVVLPSEAGRLSYARRQPHGVVGVISPFNFPLVLSMRSVAPALAAGNAVV
LKPDPQTPVSGGFLIARLFEVAGLPKGLLQVLPGAADAGEALCRDPNVRMIAFTGSTGAG
RKVAEVAGRNLKKVALELGGKNPLIILEDADLDLAARNAAWGAWLHQGQICMATGLILAH
ESIAEELTRKLVEKARALTVGNAAQGEAALGPLINQRQLKRVHDIVSDSVRAGARLEAGG
EHDRLFYQATVLSGVKPGMRAFDEEIFGPVATVVSFATDDEAVELANRTEYGLAAAIISS
SVGRAMAIGERLQCGMLHINDQTVADECINPFGGRGASGNGGSVGGPADWDEYTQWQWVT
VKDKAPVYPF