Protein Info for Pf6N2E2_1363 in Pseudomonas fluorescens FW300-N2E2

Annotation: High-affinity iron permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 284 transmembrane" amino acids 6 to 26 (21 residues), see Phobius details amino acids 38 to 59 (22 residues), see Phobius details amino acids 71 to 90 (20 residues), see Phobius details amino acids 111 to 128 (18 residues), see Phobius details amino acids 149 to 170 (22 residues), see Phobius details amino acids 182 to 202 (21 residues), see Phobius details amino acids 253 to 272 (20 residues), see Phobius details PF03239: FTR1" amino acids 2 to 266 (265 residues), 94.3 bits, see alignment E=4.4e-31

Best Hits

KEGG orthology group: K07243, high-affinity iron transporter (inferred from 99% identity to pba:PSEBR_a2687)

Predicted SEED Role

"High-affinity iron permease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A159ZV06 at UniProt or InterPro

Protein Sequence (284 amino acids)

>Pf6N2E2_1363 High-affinity iron permease (Pseudomonas fluorescens FW300-N2E2)
MTQSMFIVWRESVEALLVIGILQAWVSRQHQASQLLRYVWTGAALGLLLSGVLAGLILLA
GEAMSGTANEWFQASLALVASLLIVQMVGWMHRNARTLKHDLARHADQRLSRQGGLGLLV
LALLAVSREGSETVVFLYGAGGRLQGPQLGLFAVGALAGLVLSLLTVSLLHSSRRFISWP
RFFAISEAILLLLGAALLVSGIERVGGQLLAMDWPEAVYRAIGDALWDSSAILDDGHGFG
GFLADFTGYRASPSAMTLLVWLGYWGVVAGWLRPRKAENLPCPT