Protein Info for Pf6N2E2_134 in Pseudomonas fluorescens FW300-N2E2

Annotation: FIG00960493: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF21723: DUF1338_N
  • amino acids 9 to 190 (182 residues), 200.1 bits, E=2.6e-63
• PF07063: DUF1338
  • amino acids 195 to 409 (215 residues), 221.9 bits, E=6.1e-70

Best Hits

KEGG orthology group: None (inferred from 94% identity to pba:PSEBR_a3739)

MetaCyc: 68% identical to 2-oxoadipate dioxygenase/decarboxylase (Pseudomonas putida KT2440)
RXN-21282 [EC: 1.13.11.93]

Predicted SEED Role

"FIG00960493: hypothetical protein"

MetaCyc Pathways

• L-lysine degradation V (6/9 steps found)
• superpathway of L-lysine degradation (19/43 steps found)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.13.11.93

Sequence Analysis Tools

See A0A165YK15 at UniProt or InterPro

Protein Sequence (458 amino acids)

>Pf6N2E2_134 FIG00960493: hypothetical protein (Pseudomonas fluorescens FW300-N2E2)
MSFVSPDLIRQRFSRAMSDMYRDEVPLYGALMKLVEHTNAQVLAEDPILAAHLRSTGELE
RLDLERHGAIRVGTAAELATLGRLFAVMGMQPVGYYDLTPAGVPVHSTAFRAVHESALQV
SPFRVFTSLLRLELIEHAELRAFAESVLDKRQIFTPRALELIEQAEYQGGLSESQAEDFV
LQALETFRWHHSATVTAEQYRQLSAQHRLIADVVAFKGPHINHLTPRTLDIDIVQARMPV
HGITPKAVIEGPPRRQCPILLRQTSFKALDEPVSFTDQSPSQGSHSARFGEIEQRGAALT
PKGRALYDRLLNAARDALGDFPNEANAERYNTLMSEHFAQFPDNHDELRREALAYFRYFV
TPKGLAAKGSVERTASLERLLEQQYLRAEPLVYEDFLPVSAAGIFQSNLGDAAQSHYAGQ
SNRHAFEAALGRATIDELGLYAQTQQRSIDECRAALGV