Protein Info for Pf6N2E2_1331 in Pseudomonas fluorescens FW300-N2E2

Annotation: General substrate transporter:Major facilitator superfamily

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 418 transmembrane" amino acids 23 to 43 (21 residues), see Phobius details amino acids 60 to 83 (24 residues), see Phobius details amino acids 90 to 109 (20 residues), see Phobius details amino acids 116 to 141 (26 residues), see Phobius details amino acids 153 to 172 (20 residues), see Phobius details amino acids 178 to 198 (21 residues), see Phobius details amino acids 219 to 243 (25 residues), see Phobius details amino acids 250 to 274 (25 residues), see Phobius details amino acids 286 to 306 (21 residues), see Phobius details amino acids 312 to 335 (24 residues), see Phobius details amino acids 354 to 375 (22 residues), see Phobius details amino acids 381 to 401 (21 residues), see Phobius details PF07690: MFS_1" amino acids 25 to 287 (263 residues), 100.6 bits, see alignment E=4.4e-33 amino acids 231 to 399 (169 residues), 34.4 bits, see alignment E=5.9e-13

Best Hits

KEGG orthology group: None (inferred from 95% identity to pba:PSEBR_a2720)

Predicted SEED Role

"General substrate transporter:Major facilitator superfamily"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165Z0J2 at UniProt or InterPro

Protein Sequence (418 amino acids)

>Pf6N2E2_1331 General substrate transporter:Major facilitator superfamily (Pseudomonas fluorescens FW300-N2E2)
MNQSSSVSTAATPSRQASWREGGVLMLGSSLTIMGAVMVTPILPRLGAEFGPLEPRADLL
VPLAITGPALAIAVCAPLAGWLADRVGRKALLVIATVLYALLGALPALLDSLPSIVGVRL
LFGCTEAAVMTCCATLIADYWQGEERLRYVNRQVVTIGLVGALFFVVGGVLGEHSWRAPF
LLYLLPLLLVPAMMKVLWEPPVTKQQKVEQRVDESAPAKVAVLPLLVGYLMILGGMVLTF
IMPIQAPTLLVSLGITSSTLIGLAAGLSLLATLGGSLMWPLLRRRFGIAGCNALLLGLMG
LGLWLLMRGQSYNAVLVAVFIQGLGAGLLVPNVMAPVMNALTANTRGRGLGGFTSCLYIG
QFVSPLVVASVVVFAGDLRHAIQWLALASFTLALFWVIAGLRARGQGQASTVGSHQSS