Protein Info for Pf6N2E2_118 in Pseudomonas fluorescens FW300-N2E2

Annotation: FIG00961753: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 456 signal peptide" amino acids 1 to 30 (30 residues), see Phobius details transmembrane" amino acids 67 to 86 (20 residues), see Phobius details amino acids 98 to 116 (19 residues), see Phobius details amino acids 125 to 143 (19 residues), see Phobius details amino acids 150 to 170 (21 residues), see Phobius details amino acids 187 to 204 (18 residues), see Phobius details amino acids 209 to 227 (19 residues), see Phobius details amino acids 233 to 249 (17 residues), see Phobius details amino acids 261 to 284 (24 residues), see Phobius details amino acids 369 to 389 (21 residues), see Phobius details amino acids 406 to 425 (20 residues), see Phobius details amino acids 431 to 446 (16 residues), see Phobius details PF04932: Wzy_C" amino acids 219 to 378 (160 residues), 68.9 bits, see alignment E=2.1e-23

Best Hits

KEGG orthology group: None (inferred from 97% identity to pba:PSEBR_a3754)

Predicted SEED Role

"FIG00961753: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165YJN4 at UniProt or InterPro

Protein Sequence (456 amino acids)

>Pf6N2E2_118 FIG00961753: hypothetical protein (Pseudomonas fluorescens FW300-N2E2)
MIVPISIVSLLGLVCLALLASPYPFLAPGAVLGLVGVALLYRKPGWGLLGIAALVPFEGL
FKDSAFSGSKFLGLALILILMLQLAVHQIPATRLRSNIWRPLIGFMVLYGLSLMLSENMG
LSMTHFRELGVGLILFVITLLIGRELNLDLFCRLMTLSVTTTCVLAMFSAKYQNQGRASG
LLEDPNTFALLIAFTVPLALLLVVRGPSLLHRLFWGGCFILLLGGMTKTESRSGLVVLML
SLMIGLYHYRAQLPRIRPRHLGFAMLGLAIIIPLAIAVMPAGYVARIQSLSILSAGASAH
QDESLGRRASYILVGSQMIRENPILGSGPGTFPLHYAPTGYAKAFSANRKLGDLYRRAHN
TYLEIFSEIGVPGGLMFVGMIGLGLYNLLHARRLWLQRRDWAQADLLTHLGTSFLSLALF
LMFLSAPNHKLLWIMLALTSVLRYDAERAAPLEARP