Protein Info for Pf6N2E2_1157 in Pseudomonas fluorescens FW300-N2E2
Annotation: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 68% identical to Y6345_CUPTR: Putative hydro-lyase RALTA_B1245 (RALTA_B1245) from Cupriavidus taiwanensis (strain DSM 17343 / BCRC 17206 / CIP 107171 / LMG 19424 / R1)
KEGG orthology group: None (inferred from 99% identity to pba:PSEBR_a2925)Predicted SEED Role
"hypothetical protein possibly connected to lactam utilization and allophanate hydrolase"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A159ZV05 at UniProt or InterPro
Protein Sequence (263 amino acids)
>Pf6N2E2_1157 hypothetical protein possibly connected to lactam utilization and allophanate hydrolase (Pseudomonas fluorescens FW300-N2E2) MMSFEQLQQCTPLALRQNIAAGQYQGHTSGLGQGRVQANIVILPGDWANEFLRYCTLNRQ ACPVLDVTEPGDPFFRNLGAAIDIRHEVPQYRVYRHGELSEAPLDIEHLWQDDLVAFALG CSFSFEQPLLEAGIRLRHIELGRNVAMFQTNIDTRPTARLSGKMVVTMRPMKAAAAIQAI QITGRMPNVHGAPVHIGDPSLIGIQSLDSPDYGDAVPVEADEIPVFWACGVTPQSVVQAS RPPLCITHAPGCMLVTDLWNSDL