Protein Info for Pf1N1B4_81 in Pseudomonas fluorescens FW300-N1B4

Annotation: Putative sulfate permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 261 transmembrane" amino acids 6 to 27 (22 residues), see Phobius details amino acids 33 to 54 (22 residues), see Phobius details amino acids 72 to 93 (22 residues), see Phobius details amino acids 104 to 123 (20 residues), see Phobius details amino acids 149 to 180 (32 residues), see Phobius details amino acids 192 to 208 (17 residues), see Phobius details amino acids 215 to 235 (21 residues), see Phobius details amino acids 243 to 260 (18 residues), see Phobius details PF01925: TauE" amino acids 8 to 259 (252 residues), 180.4 bits, see alignment E=2.4e-57

Best Hits

KEGG orthology group: K07090, (no description) (inferred from 92% identity to pfo:Pfl01_3729)

Predicted SEED Role

"Putative sulfate permease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A166MEX1 at UniProt or InterPro

Protein Sequence (261 amino acids)

>Pf1N1B4_81 Putative sulfate permease (Pseudomonas fluorescens FW300-N1B4)
MDFVNFGLVVAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSSGV
LVHRKNKNIDWAITGWLTLGSVPAVALTLWFLSSLQTSPDAMNAVIKQALGFVLFATALA
IFFKKRLLDFAHKRAGGHYNPSGPRLNALTVITGLVLGTMVALTSIGAGALGTVALFILY
PMLPTRRLVGTEIAHAVPLTLVAGLGHASMGNMDWHVLGYLLVGSLPGIYLGSHLTGRIS
DELLRPCLATMLVLIGYKLAF