Protein Info for Pf1N1B4_711 in Pseudomonas fluorescens FW300-N1B4

Annotation: Superoxide dismutase [Fe] (EC 1.15.1.1)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00081: Sod_Fe_N
  • amino acids 3 to 82 (80 residues), 113.1 bits, E=6.7e-37
• PF02777: Sod_Fe_C
  • amino acids 89 to 189 (101 residues), 137.5 bits, E=1.5e-44

Best Hits

Swiss-Prot: 96% identical to SODF_PSEPU: Superoxide dismutase [Fe] (sodB) from Pseudomonas putida

KEGG orthology group: K04564, superoxide dismutase, Fe-Mn family [EC: 1.15.1.1] (inferred from 94% identity to ppw:PputW619_0981)

MetaCyc: 70% identical to superoxide dismutase (Fe) (Escherichia coli K-12 substr. MG1655)
Superoxide dismutase. [EC: 1.15.1.1]

Predicted SEED Role

"Superoxide dismutase [Fe] (EC 1.15.1.1)" in subsystem Oxidative stress (EC 1.15.1.1)

MetaCyc Pathways

• reactive oxygen species degradation (4/4 steps found)
• superoxide radicals degradation (2/2 steps found)
• ethene biosynthesis III (microbes) (5/7 steps found)

Isozymes

Compare fitness of predicted isozymes for: 1.15.1.1

Use Curated BLAST to search for 1.15.1.1

Sequence Analysis Tools

See A0A166MSS9 at UniProt or InterPro

Protein Sequence (198 amino acids)

>Pf1N1B4_711 Superoxide dismutase [Fe] (EC 1.15.1.1) (Pseudomonas fluorescens FW300-N1B4)
MAFELPPLPYAHDALQPHISEETLQYHHDKHHNTYVVNLNNLVPGTEFEGKTLEEIVKTS
SGGIFNNAAQVWNHTFYWNCLAPNAGGQPTGALADAINAAFGSFDKFKEEFSKTSIGTFG
SGWGWLVKKADGSLALASTIGAGNPLTSGDTPLLTCDVWEHAYYIDYRNLRPKYVEAFWN
LVNWKFVAEQFEGKTFTA