Protein Info for Pf1N1B4_5909 in Pseudomonas fluorescens FW300-N1B4

Annotation: Exoenzymes regulatory protein AepA precursor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 612 PF07969: Amidohydro_3" amino acids 50 to 532 (483 residues), 452 bits, see alignment E=4.2e-139

Best Hits

KEGG orthology group: K07047, (no description) (inferred from 95% identity to pba:PSEBR_a3599)

Predicted SEED Role

"Exoenzymes regulatory protein AepA precursor"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A166R1A1 at UniProt or InterPro

Protein Sequence (612 amino acids)

>Pf1N1B4_5909 Exoenzymes regulatory protein AepA precursor (Pseudomonas fluorescens FW300-N1B4)
MNADLILFNGQFHTVDREKPLASAVAISDGRFVAVGTDADAMALRGSGTQVIDLKGRCVI
PGLNDSHLHLIRGGLNYNLELRWEGVPSLADALRMLKDQADRTPTPQWVRVVGGWNEFQF
AEKRMPTLEELNQAAPDTPVFVLHLYDRALLNRAALRVAGYTRNTPNPPGGEIVRDANGE
PTGMLVARPNAMILYSTLAKGPKLPLEYQVNSTRQFMRELNRLGLTSAIDAGGGFQNYPD
DYAVIEQLAKDQQLTVRIAYNLFTQKPKEELTDFKNWTGSVKLHQGDDFLRHNGAGEMLV
FSAADFEDFLEPRPDLPQTMEDELETVVRHLVEQRWPFRLHATYNESISRMLDVFEKVNR
DIPFNGLPWFFDHAETITPQNIERVRALGGGIAIQDRMAFQGEYFAERYGAKAAENTPPI
KRMLAEGVPVGAGTDATRVSSYNPWTSLYWMVSGRTVGGLALHSEGLSRQTALELFTHGS
AWFSSEQGKKGQIKVGQLADVAALSADFFSVEEEAIKWIESVLTVVGGKVVYAAGDFEKL
GPASVPVLPDWSPVVKVPGHWRPASPMQAQVHQCSGPCAVHSHSHERARLSNAPVSDFQG
FWGAFGCSCFAF