Protein Info for Pf1N1B4_578 in Pseudomonas fluorescens FW300-N1B4

Annotation: enoyl-CoA hydratase, R-specific

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 156 PF01575: MaoC_dehydratas" amino acids 17 to 115 (99 residues), 93.9 bits, see alignment E=5.6e-31 PF13452: MaoC_dehydrat_N" amino acids 17 to 131 (115 residues), 39.9 bits, see alignment E=4.6e-14

Best Hits

KEGG orthology group: None (inferred from 97% identity to pfl:PFL_4601)

MetaCyc: 87% identical to (R)-specific enoyl-CoA hydratase (Pseudomonas oleovorans)
RXN-7699 [EC: 4.2.1.119]

Predicted SEED Role

"enoyl-CoA hydratase, R-specific" in subsystem n-Phenylalkanoic acid degradation

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.2.1.119

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A166MQA1 at UniProt or InterPro

Protein Sequence (156 amino acids)

>Pf1N1B4_578 enoyl-CoA hydratase, R-specific (Pseudomonas fluorescens FW300-N1B4)
MTQVTNTPYEALEVGQTASYSKTVEERDIQLFAAMSGDHNPVHLDAEFAAASMFKERIAH
GMFSGALISAAVACELPGPGTIYIGQTMSFQKPVKIGDTLTVRLEILEKLPKFRVRIATR
VFNQRDELVVDGEAEILAPRKQQTVTLPTLPAISIG