Protein Info for Pf1N1B4_5375 in Pseudomonas fluorescens FW300-N1B4

Annotation: putative DNA methyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 422 PF14338: Mrr_N" amino acids 33 to 100 (68 residues), 30.3 bits, see alignment E=3.9e-11 PF01555: N6_N4_Mtase" amino acids 138 to 398 (261 residues), 95.2 bits, see alignment E=6e-31

Best Hits

KEGG orthology group: None (inferred from 61% identity to pfs:pQBR0076)

Predicted SEED Role

"putative DNA methyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A162B265 at UniProt or InterPro

Protein Sequence (422 amino acids)

>Pf1N1B4_5375 putative DNA methyltransferase (Pseudomonas fluorescens FW300-N1B4)
MRRTSTPTQAELFGTEEIASLYKANPDTPLNNAALYRLAAKKLGLDDEAMNYRDPVGASG
QMHSLAHRRIRWMQQSLKHLRILERVKGERGVWRLTEEAKRDLHAAKPGVKLLGYSTSLG
VAIWGPSGDIFKGLNVPVSLIFSSPPYPLSKARAYGNPNEREIVDFICDTLEPVIEALAD
DGSLCLNVSNDIFLPGMPARSTYVERLVLEICDRFSPMYLMDKIIWANPAKIPGPIAWAS
KSRQQLNTGYEPILWFARNPLKVKSNNNRVLEPHTEKHLKLMQSGGEQREASYGDGAYRL
KVGSFGNMTEGRIPKNVLTRGSRCAHGLRHRQASIDLGLPQHGAGQPFSIPEFMIQFLTE
EGDLVVDPFAGRNMTSYAAEMNNRRWMAGEINLEYIRTGAELFRGRPGFRLNPQIEQAFK
RD