Gene info for Pf1N1B4_5179 in Pseudomonas fluorescens FW300-N1B4

Annotation: Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA
Type 2: 23S (large subunit) ribosomal RNA
Located on scaffold unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon, - strand, nucleotides 1,409,746 to 1,412,637
See nucleotide sequence around Pf1N1B4_5179 or for all of scaffold unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon

Nearby Genes

500 ntPf1N1B4_1233 and Pf1N1B4_1234 are separated by 118 nucleotidesPf1N1B4_1234 and Pf1N1B4_1235 overlap by 4 nucleotidesPf1N1B4_1235 and Pf1N1B4_1236 overlap by 4 nucleotidesPf1N1B4_1236 and Pf1N1B4_5178 are separated by 154 nucleotidesPf1N1B4_5178 and Pf1N1B4_5179 are separated by 171 nucleotidesPf1N1B4_5179 and Pf1N1B4_5180 are separated by 252 nucleotidesPf1N1B4_5180 and Pf1N1B4_5181 are separated by 33 nucleotidesPf1N1B4_5181 and Pf1N1B4_5182 are separated by 81 nucleotidesPf1N1B4_5182 and Pf1N1B4_1237 are separated by 312 nucleotidesPf1N1B4_1237 and Pf1N1B4_1238 are separated by 154 nucleotides Pf1N1B4_1233 - Uncharacterized protein YfiR precursor, at 1,399,363 to 1,399,938 _1233 Pf1N1B4_1234 - Exodeoxyribonuclease V alpha chain (EC 3.1.11.5), at 1,400,057 to 1,402,165 _1234 Pf1N1B4_1235 - Exodeoxyribonuclease V beta chain (EC 3.1.11.5), at 1,402,162 to 1,405,851 _1235 Pf1N1B4_1236 - Exodeoxyribonuclease V gamma chain (EC 3.1.11.5), at 1,405,848 to 1,409,300 _1236 Pf1N1B4_5178 - 5S RNA, at 1,409,455 to 1,409,574 _5178 Pf1N1B4_5179 - Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA, at 1,409,746 to 1,412,637 _5179 Pf1N1B4_5180 - tRNA-Ala-TGC, at 1,412,890 to 1,412,962 _5180 Pf1N1B4_5181 - tRNA-Ile-GAT, at 1,412,996 to 1,413,069 _5181 Pf1N1B4_5182 - Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA, at 1,413,151 to 1,414,679 _5182 Pf1N1B4_1237 - hypothetical protein, at 1,414,992 to 1,415,171 _1237 Pf1N1B4_1238 - Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27), at 1,415,326 to 1,416,819 _1238
Locus Name Description Strand Phenotype
Pf1N1B4_1233 Uncharacterized protein YfiR precursor - insig.
Pf1N1B4_1234 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) - strong
Pf1N1B4_1235 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) - sig.
Pf1N1B4_1236 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) - strong
Pf1N1B4_5178 5S RNA - no data
Pf1N1B4_5179 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - no data
Pf1N1B4_5180 tRNA-Ala-TGC - no data
Pf1N1B4_5181 tRNA-Ile-GAT - no data
Pf1N1B4_5182 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - no data
Pf1N1B4_1237 hypothetical protein - no data
Pf1N1B4_1238 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) - insig.

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