Protein Info for Pf1N1B4_4563 in Pseudomonas fluorescens FW300-N1B4

Annotation: Sulfate transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 558 transmembrane" amino acids 20 to 39 (20 residues), see Phobius details amino acids 45 to 64 (20 residues), see Phobius details amino acids 69 to 90 (22 residues), see Phobius details amino acids 96 to 118 (23 residues), see Phobius details amino acids 131 to 151 (21 residues), see Phobius details amino acids 175 to 194 (20 residues), see Phobius details amino acids 201 to 223 (23 residues), see Phobius details amino acids 252 to 273 (22 residues), see Phobius details amino acids 285 to 305 (21 residues), see Phobius details amino acids 322 to 343 (22 residues), see Phobius details amino acids 349 to 372 (24 residues), see Phobius details amino acids 378 to 407 (30 residues), see Phobius details PF00916: Sulfate_transp" amino acids 20 to 362 (343 residues), 208.6 bits, see alignment E=1.4e-65 PF01740: STAS" amino acids 436 to 529 (94 residues), 34.9 bits, see alignment E=1.1e-12

Best Hits

KEGG orthology group: None (inferred from 75% identity to pfl:PFL_2632)

Predicted SEED Role

"Sulfate permease" in subsystem Cysteine Biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A166Q457 at UniProt or InterPro

Protein Sequence (558 amino acids)

>Pf1N1B4_4563 Sulfate transporter (Pseudomonas fluorescens FW300-N1B4)
MAGVTGATAQPRADIPNRWLDVLAGLSIAGLLLPEAVAYSSIAALPPQAGVIALFAGLLC
YGLLGTSRFAIVSATSSSAAVLAASTATLANGDSALRMSLAIGLVLVTGGFFLLASLLRL
GSVTSFIAKPVLRGFALGLAMTIILKQVASAVDVHLNSGNLIHLMPQLLEQLPQWNRVGA
LVAAVSLVVLWLCARVRRLPGGLLVVALGIAAGQWLNLPAYGVKLIGVIDLSLEMPRLPV
LPFTDWLRLGELAFAMVMILYAESYGSITSFAIKHGARVSSNRDLLALGAANLLSGLFHG
MPAGAGYSATSANEAAGAGSRLAGAVAAGVVLLIVLTVLPYIALTPEPVLAAIVIHALAR
GLSLQPLGRYFIWRRDRLLVICAVAAVLVLGVLDGLLVAVVISVMLMLKQMSSADIQVLG
QMGSGHDYVDLQRHPHALQTPGILILRPSEALFFANVERILGGALHLARHSEPRVHTIIL
SLEESPDLDGTSIEALEAFFLQVRALNMLLILARLKDQAQAVLSILPAQEREKVILSDLS
VDVAVHQALTLARQVSQA