Protein Info for Pf1N1B4_3772 in Pseudomonas fluorescens FW300-N1B4

Annotation: Glutaredoxin

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 123 PF00462: Glutaredoxin" amino acids 44 to 99 (56 residues), 50.1 bits, see alignment E=4e-17 PF13417: GST_N_3" amino acids 45 to 121 (77 residues), 55.7 bits, see alignment E=7.4e-19 PF13409: GST_N_2" amino acids 50 to 119 (70 residues), 42.8 bits, see alignment E=9.7e-15

Best Hits

KEGG orthology group: None (inferred from 93% identity to pba:PSEBR_a4179)

Predicted SEED Role

"Glutaredoxin" in subsystem Glutaredoxins or Glutathione: Redox cycle

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A166PJL0 at UniProt or InterPro

Protein Sequence (123 amino acids)

>Pf1N1B4_3772 Glutaredoxin (Pseudomonas fluorescens FW300-N1B4)
MFVKALRVGLGQLIIFIDFITRPGKKQRPAEAQAQVNTAAKDLTLYQFHACPFCVKTRRT
LRRLNVPVALRDAKNNEQDRQALLEQGGKIKVPCLRIEENGQTTWMYESKVIIDYLDKRF
AAA