Protein Info for Pf1N1B4_334 in Pseudomonas fluorescens FW300-N1B4

Annotation: Adenylylsulfate kinase (EC 2.7.1.25)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 178 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details TIGR00455: adenylyl-sulfate kinase" amino acids 2 to 172 (171 residues), 246.5 bits, see alignment E=7.2e-78 PF06414: Zeta_toxin" amino acids 3 to 46 (44 residues), 23.3 bits, see alignment E=7.4e-09 PF01583: APS_kinase" amino acids 6 to 159 (154 residues), 239.5 bits, see alignment E=3.2e-75

Best Hits

Swiss-Prot: 66% identical to CYSC_PSEAE: Adenylyl-sulfate kinase (cysC) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

KEGG orthology group: K00860, adenylylsulfate kinase [EC: 2.7.1.25] (inferred from 76% identity to avn:Avin_16180)

Predicted SEED Role

"Adenylylsulfate kinase (EC 2.7.1.25)" in subsystem Cysteine Biosynthesis or O-Methyl Phosphoramidate Capsule Modification in Campylobacter (EC 2.7.1.25)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.1.25

Use Curated BLAST to search for 2.7.1.25

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A166MK72 at UniProt or InterPro

Protein Sequence (178 amino acids)

>Pf1N1B4_334 Adenylylsulfate kinase (EC 2.7.1.25) (Pseudomonas fluorescens FW300-N1B4)
VKGQKPAVIWLTGLSGAGKSTIANALEQALVEKGRHTFLLDGDNLRMGLCKDLGFADVDR
VENIRRVAEVSKLLVDAGLIVITAFISPFQQDRAMARDVIGPDEFVEVFVDTSLEECERR
DPKGLYGKARAGEIKNFTGIDSAYEAPTNPNIRINTVEEDLAVSVNRVLDYLDKRSAQ