Protein Info for Pf1N1B4_3292 in Pseudomonas fluorescens FW300-N1B4

Annotation: NAD/FAD-utilizing enzyme apparently involved in cell division

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 186 transmembrane" amino acids 63 to 82 (20 residues), see Phobius details amino acids 90 to 114 (25 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 61% identity to svo:SVI_0003)

Predicted SEED Role

"NAD/FAD-utilizing enzyme apparently involved in cell division"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A166P7X9 at UniProt or InterPro

Protein Sequence (186 amino acids)

>Pf1N1B4_3292 NAD/FAD-utilizing enzyme apparently involved in cell division (Pseudomonas fluorescens FW300-N1B4)
MNRHYYISDNLDDLEAVENELEANGINTEQIHVLSEQVADVEEHHLHEVNSLMKQDVVHS
GEIGAVVGVPLAALVLGGAYWMGWTESAAGWVPFIFLAIVIFGFCIWEGGFFGIQVPNAH
FRSFKQMVEEGKHIFFVDVEPNQEPILDRVIEHHPTLTIAGTGTAAPHWTVAWQHKWHQF
KRVISG