Protein Info for Pf1N1B4_329 in Pseudomonas fluorescens FW300-N1B4

Annotation: Acyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 transmembrane" amino acids 12 to 35 (24 residues), see Phobius details amino acids 42 to 61 (20 residues), see Phobius details amino acids 81 to 100 (20 residues), see Phobius details amino acids 128 to 149 (22 residues), see Phobius details amino acids 156 to 177 (22 residues), see Phobius details amino acids 183 to 201 (19 residues), see Phobius details amino acids 209 to 227 (19 residues), see Phobius details amino acids 238 to 256 (19 residues), see Phobius details amino acids 276 to 295 (20 residues), see Phobius details amino acids 301 to 320 (20 residues), see Phobius details PF01757: Acyl_transf_3" amino acids 7 to 320 (314 residues), 99.7 bits, see alignment E=8.9e-33

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A162AQM3 at UniProt or InterPro

Protein Sequence (350 amino acids)

>Pf1N1B4_329 Acyltransferase (Pseudomonas fluorescens FW300-N1B4)
MQQQHINNLDGFRGFAALVVVVSHYSNLTGMFGGVLGEGGGQAGVMLFFMLTGFLIGKLH
LDQEFTKSSLVEYVFKRVARVYPLFLLVSALPAFLAWSGFPGKIALSEIDSVSVYLGQVA
LVERGFSVLWTIQIEFIFYMAFVAIWFFASRFGKMATAATLLGITCLLVAGGLSYSYDFF
NRCHYFIFGLIVVNASSYKVVSDSTKIRSVIGVLLLLSVPATFPKFSRLYFDLEIDSWRS
FIVMAQFVTLFVLVVSDRYYLSAILSWSPLRWVGKISYSVYLLHYFVLLSLLSWLPSGDS
YLISFSLVLAVTLLISWLSYKFVERPLQRVVLAPLKSFKYSGRLSESGRI