Protein Info for Pf1N1B4_3271 in Pseudomonas fluorescens FW300-N1B4

Annotation: Bicyclomycin resistance protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 388 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details transmembrane" amino acids 43 to 60 (18 residues), see Phobius details amino acids 72 to 90 (19 residues), see Phobius details amino acids 97 to 118 (22 residues), see Phobius details amino acids 130 to 149 (20 residues), see Phobius details amino acids 161 to 185 (25 residues), see Phobius details amino acids 206 to 229 (24 residues), see Phobius details amino acids 243 to 265 (23 residues), see Phobius details amino acids 272 to 293 (22 residues), see Phobius details amino acids 299 to 320 (22 residues), see Phobius details amino acids 332 to 356 (25 residues), see Phobius details amino acids 362 to 382 (21 residues), see Phobius details PF07690: MFS_1" amino acids 11 to 348 (338 residues), 140.8 bits, see alignment E=2.6e-45

Best Hits

KEGG orthology group: None (inferred from 77% identity to pfo:Pfl01_1312)

Predicted SEED Role

"Bicyclomycin resistance protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A166P7N0 at UniProt or InterPro

Protein Sequence (388 amino acids)

>Pf1N1B4_3271 Bicyclomycin resistance protein (Pseudomonas fluorescens FW300-N1B4)
MKSSTTLLITCCTVFLAQLGMSIYLSALPEIARDLSADASQVSWGLAVYLIGMALPMLFW
GSLGQRIGRKPVLLAALGIYGVGNLALPLGQTLESFLFFRLIQGVGASGISVMARVLIRD
SFRGDLLAKALSWISISFVVALGIGQYLGSIIQVALGWPMIFYLLGGVSLLMAVVVARLT
FPVLAAENTLSSAWTSYWHILGHRAFLLPALVGGLGYGVIVAFNTAAPLILQGPFNWSAV
EYGLLGWPISAAYFLGAVAVNRFVLRTGQRQLMTAGVGLVLAGSAVMLLGSIAGTSIELL
FWLPYCFAVFGQSLNYPISLSLANEGSPVGGAYAMALSGFIHQLMAAVIGGIASLIASQQ
AWPLSLLCTLLAVGALLCVVLAPGRRTT