Protein Info for Pf1N1B4_2162 in Pseudomonas fluorescens FW300-N1B4

Annotation: MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 497 TIGR00368: Mg chelatase-like protein" amino acids 6 to 492 (487 residues), 624.9 bits, see alignment E=4.7e-192 PF05362: Lon_C" amino acids 19 to 145 (127 residues), 29.2 bits, see alignment E=2.4e-10 PF13541: ChlI" amino acids 21 to 142 (122 residues), 152 bits, see alignment E=2.5e-48 PF01078: Mg_chelatase" amino acids 190 to 391 (202 residues), 316 bits, see alignment E=3.3e-98 PF07728: AAA_5" amino acids 213 to 348 (136 residues), 32.4 bits, see alignment E=3.1e-11 PF00493: MCM" amino acids 287 to 387 (101 residues), 27 bits, see alignment E=8.1e-10 PF13335: Mg_chelatase_C" amino acids 402 to 492 (91 residues), 94.2 bits, see alignment E=2.1e-30

Best Hits

KEGG orthology group: K07391, magnesium chelatase family protein (inferred from 92% identity to pfo:Pfl01_5508)

Predicted SEED Role

"MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A162AU95 at UniProt or InterPro

Protein Sequence (497 amino acids)

>Pf1N1B4_2162 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein (Pseudomonas fluorescens FW300-N1B4)
MSLSIVHSRAQVGVEAPAVTVEVHLANGLPSLTMVGLPEAAVKESKDRVRSAIINSGLQF
PARRITLNLAPADLPKDGGRFDLAIALGILSASVQVPTLTLDDVECLGELALSGAVRAVR
GVLPAALAARKAGRTLVVPRANAEEACLASGLKVIAVDHLLEAVAHFNGHTPIAPYASNG
LLYASKPYPDLNEVQGQLAAKRALLIAAAGAHNLLFSGPPGTGKTLLASRLPGLLPPLAE
SEALEVAAIQSVASCVPLSHWPQRPFRQPHHSASGPALVGGGSKPQPGEITLAHHGVLFL
DELPEFDRKVLEVLREPLESGHIVISRAKDRVRFPARFQLVAAMNPCPCGYLGEPSGKCS
CTPDMVQRYRNKLSGPLLDRIDLHLTVARESTALNPIKAGDDTASASALVAQARERQQQR
QGCANAFLDLPGLRQHCALSKADEGWLESACERLTLSLRAAHRLLKVARTLADLEQVDAI
SRSHVAEALQYRPSAPS