Protein Info for Pf1N1B4_2073 in Pseudomonas fluorescens FW300-N1B4

Annotation: Serine/threonine protein kinase (EC 2.7.11.1) PpkA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1014 transmembrane" amino acids 336 to 358 (23 residues), see Phobius details PF00069: Pkinase" amino acids 12 to 254 (243 residues), 157.8 bits, see alignment E=3.7e-50 PF07714: PK_Tyr_Ser-Thr" amino acids 15 to 252 (238 residues), 111.6 bits, see alignment E=4.1e-36

Best Hits

KEGG orthology group: K11912, serine/threonine-protein kinase PpkA [EC: 2.7.11.1] (inferred from 89% identity to pba:PSEBR_a5549)

Predicted SEED Role

"Serine/threonine protein kinase (EC 2.7.11.1) PpkA" (EC 2.7.11.1)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.11.1

Use Curated BLAST to search for 2.7.11.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A166NJA9 at UniProt or InterPro

Protein Sequence (1014 amino acids)

>Pf1N1B4_2073 Serine/threonine protein kinase (EC 2.7.11.1) PpkA (Pseudomonas fluorescens FW300-N1B4)
MNPTVNILIPGYDIDGEIGEGAMASVYLATQRSLERKVALKVMAAALAADPSFCERFLRE
GKTLARLSHPHTVTIHDIGHVGELYYMAMEFLPNGTLKERIAAGLTPEKGLIYIRQIASA
LGYAHGLGLVHRDVKPANILFRADGTAVLSDFGIAKSMDDRTQFTQAGFAVGTPSYMSPE
QARGQDIDGRADLYALGVVLYEILVGKLPYTGNDALSTALAHLTEPLPELPVHHGRYQEV
LRKLLAKDPAERFADAAALLQALDNLPRESIEATTIRPLPIPVVPIAVSNDLVGLTPVSI
DIPTGPAQPQPRSNPVAPTVKPTPSSTVSEQRKGPVFALAAVAVAVALVLGGAGYWWLSG
DGEADAKVPVVSAPPASPPPTVAPPVNPPVATEIDGGQRPLLMAGKKTLFQRVLSKPGAK
LASEPGATPDKALPAFSVLYVYQRKEVDGSPWLRVGAATDGRSDGWLPAAQVSDWKQSLV
LKFTERSGRAPVMFLRQPGDVERLLADPSAAKNLLLKAQQNHEDNQQVLALEPAASAVPQ
NQFYLLPIFDSRESFDENGQPVQLLNVASIDPGNAPKAATNNTPITTANADAFRTAVVLV
VDTTVSMQPYIDQVRDVVHQLQTRIAERGEQDSVSFGLVGFRSSTQKTPGLEYVAKTLIT
LDQGRDPQRFMDLARQVKASTVSSHSFNEDAFAGVMEAVEGMDWSGYGGRLILLVTDAGA
LRKNDPYAATQMNEAEVRQAALGKQIKIYALHLLSDAGKKTHSGAQSQYRTLTADANPQI
GDLYIPVPGADVRKFGERVDEIGSVFADLVHQVRSDKPQTVPLLSAAPSLSDKSAAVGYA
MHMDFLGRKAASQAPQLVSAWTADRDLTNPALPAFQVCVMLTKLQLNDLQQSLKLIVDAA
RKTQTSPKNFFQEIASASAYMSRDPSALRKGGNLADGGVLGEYLEGLPYRSKSLNMTQDL
WLSLSVAEQEDFIDELDSKIRLYETFHNDLANWVRFGDAEPGDALYRVPLSTLP