Protein Info for Pf1N1B4_1956 in Pseudomonas fluorescens FW300-N1B4

Annotation: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 288 PF01243: Putative_PNPOx" amino acids 6 to 94 (89 residues), 31.5 bits, see alignment E=7.9e-12 amino acids 137 to 231 (95 residues), 47.7 bits, see alignment E=7.3e-17

Best Hits

KEGG orthology group: K07006, (no description) (inferred from 60% identity to axy:AXYL_02379)

Predicted SEED Role

"Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)" in subsystem Bacterial hemoglobins or Flavohaemoglobin or Glutaredoxins (EC 1.14.12.17)

Isozymes

Compare fitness of predicted isozymes for: 1.14.12.17

Use Curated BLAST to search for 1.14.12.17

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A166NH18 at UniProt or InterPro

Protein Sequence (288 amino acids)

>Pf1N1B4_1956 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) (Pseudomonas fluorescens FW300-N1B4)
VIRSEMPDQHRTFYQQLPFMLYGAVDADGNAWASILEGAPGFAHSPEPALLQFGSLPGHD
DPAQLQEGAAIGLLGIELHTRRRNRLNGRVGAVTTSGFEVTVQQSFGNCPKYIQLRQFRS
VPLADPATRVAQHLNGLDDAAKAMIAGADTFFVASYVDVDGQRSVDVSHRGGQAGFVQVE
GNRLTIPDFAGNLFFNTLGNLLINPRAGLLFIDFDSGDLLHLSGRTQIILEGPQVEAFQG
AERLWTFEVEHVVRRPAALALRWRFDGVSPTSLLTGTWAQANASAKPG