Protein Info for Pf1N1B4_1955 in Pseudomonas fluorescens FW300-N1B4

Annotation: Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 208 PF02798: GST_N" amino acids 4 to 76 (73 residues), 61.8 bits, see alignment E=1.9e-20 PF13417: GST_N_3" amino acids 6 to 80 (75 residues), 47.5 bits, see alignment E=5.3e-16 PF13409: GST_N_2" amino acids 12 to 76 (65 residues), 58.8 bits, see alignment E=2e-19 PF13410: GST_C_2" amino acids 126 to 187 (62 residues), 35.1 bits, see alignment E=3.6e-12 PF14497: GST_C_3" amino acids 133 to 193 (61 residues), 26.4 bits, see alignment E=2e-09 PF00043: GST_C" amino acids 135 to 192 (58 residues), 34.5 bits, see alignment E=5.9e-12

Best Hits

Swiss-Prot: 64% identical to GSTA_RHILE: Protein GstA (gstA) from Rhizobium leguminosarum

KEGG orthology group: K00799, glutathione S-transferase [EC: 2.5.1.18] (inferred from 83% identity to pfo:Pfl01_5690)

Predicted SEED Role

"Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18)" in subsystem Glutathione: Non-redox reactions (EC 2.5.1.18)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.5.1.18

Use Curated BLAST to search for 2.5.1.18

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A161Z241 at UniProt or InterPro

Protein Sequence (208 amino acids)

>Pf1N1B4_1955 Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18) (Pseudomonas fluorescens FW300-N1B4)
MQAIKLYNFPRSGHAHRVELMLALLQLPTELIFVDLAKGAHKQADFLALNPFGQVPVIDD
QGVVLADSNAILVYLALKYGNGRWLPTDPVGAAKVQRWLSVAAGPIAFGPGRARLITVFG
APYNAQEVIAYAHSWLKVIDQELGATAYLAGGEPTIADIAAYSYIAHAPEGNVSLDDYPN
IRAWLARVEVLPGFVGMPRTVAGLQKTA