Protein Info for Pf1N1B4_1515 in Pseudomonas fluorescens FW300-N1B4

Annotation: FIG025233: SAM-dependent methyltransferases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 241 PF13489: Methyltransf_23" amino acids 26 to 171 (146 residues), 57.8 bits, see alignment E=3.5e-19 PF13847: Methyltransf_31" amino acids 49 to 165 (117 residues), 66.1 bits, see alignment E=9.1e-22 PF01209: Ubie_methyltran" amino acids 49 to 154 (106 residues), 33 bits, see alignment E=1.2e-11 PF08242: Methyltransf_12" amino acids 51 to 146 (96 residues), 53.7 bits, see alignment E=8.6e-18 PF13649: Methyltransf_25" amino acids 51 to 144 (94 residues), 72.4 bits, see alignment E=1.2e-23 PF08241: Methyltransf_11" amino acids 51 to 148 (98 residues), 84.6 bits, see alignment E=1.9e-27

Best Hits

KEGG orthology group: None (inferred from 89% identity to pba:PSEBR_a445)

Predicted SEED Role

"FIG025233: SAM-dependent methyltransferases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A166N8D1 at UniProt or InterPro

Protein Sequence (241 amino acids)

>Pf1N1B4_1515 FIG025233: SAM-dependent methyltransferases (Pseudomonas fluorescens FW300-N1B4)
MSYLSDNYVEETRFGFWFLRSHTWQHHVLRVAINDLRDLFSAPLPANPVLLDAGCGQGKS
FQYLRQTFAPQRLIGLDADPHSLNLSGEEATRQGMDVELIGSDCASINVPDASVDLLFCH
QTFHHLVEQDRALAEFYRVLKPGGYLLFAESTEAYIDTWVIRWLFRHPMHVQKSAAGYLD
MIRRQGFEFDPQNVSYPYLWWSRAKDFGLLERFGLRQPKPFGQREETLVNVVARKPLEGY
A