Protein Info for Pf1N1B4_1086 in Pseudomonas fluorescens FW300-N1B4

Annotation: Manganese superoxide dismutase (EC 1.15.1.1)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00081: Sod_Fe_N
  • amino acids 3 to 89 (87 residues), 116.1 bits, E=8.2e-38
• PF02777: Sod_Fe_C
  • amino acids 96 to 197 (102 residues), 134.2 bits, E=1.6e-43

Best Hits

Swiss-Prot: 83% identical to SODM_PSEPU: Superoxide dismutase [Mn] (sodA) from Pseudomonas putida

KEGG orthology group: K04564, superoxide dismutase, Fe-Mn family [EC: 1.15.1.1] (inferred from 94% identity to pfo:Pfl01_0851)

MetaCyc: 42% identical to superoxide dismutase (Fe) (Burkholderia sp. AK-5)
Superoxide dismutase. [EC: 1.15.1.1]

Predicted SEED Role

"Manganese superoxide dismutase (EC 1.15.1.1)" in subsystem Nitric oxide synthase or Oxidative stress (EC 1.15.1.1)

MetaCyc Pathways

• reactive oxygen species degradation (4/4 steps found)
• superoxide radicals degradation (2/2 steps found)
• ethene biosynthesis III (microbes) (5/7 steps found)

Isozymes

Compare fitness of predicted isozymes for: 1.15.1.1

Use Curated BLAST to search for 1.15.1.1

Sequence Analysis Tools

See A0A161Z5A2 at UniProt or InterPro

Protein Sequence (203 amino acids)

>Pf1N1B4_1086 Manganese superoxide dismutase (EC 1.15.1.1) (Pseudomonas fluorescens FW300-N1B4)
MAFTLPALPYAYDALEPHIDAQTMEIHYTKHHQTYINNLNAAVEGTEFAEWPVEKLVAAV
QQLPEKLRAAVINQGGGHANHSLFWEVMAPNGGGQPEGTLAKAIDEQLGGLDSFKEAFTK
AALTRFGSGWAWLSVTPQKTLIVESSGNQDSPLMNGNTPILGLDVWEHAYYLRYQNRRPE
YINAFYNVINWPEVATRYQAALV