Protein Info for PFLU_RS30025 in Pseudomonas fluorescens SBW25-INTG

Annotation: DUF692 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 281 PF05114: DUF692" amino acids 10 to 269 (260 residues), 377.3 bits, see alignment E=1.8e-117

Best Hits

Swiss-Prot: 50% identical to Y2906_CAUVC: UPF0276 protein CC_2906 (CC_2906) from Caulobacter vibrioides (strain ATCC 19089 / CB15)

KEGG orthology group: K09930, hypothetical protein (inferred from 100% identity to pfs:PFLU6099)

Predicted SEED Role

"Uncharacterized protein conserved in bacteria, NMA0228-like"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See C3K1C7 at UniProt or InterPro

Protein Sequence (281 amino acids)

>PFLU_RS30025 DUF692 domain-containing protein (Pseudomonas fluorescens SBW25-INTG)
MATSLPFLGYGLGLRNEYYEQILEQSPAVDWFEVISENYLVQGGKALYYLDAIAERYPLV
MHGVSLSIGGPHALDTDYLKQIKQLAERIRPAWVSDHLCWSRGSAHQLHDLLPLPYTEES
LYHVAARVRQVQDALQRPLVLENVSSYVRSKADEFTEWEFLNALAHLTGCQLLLDVNNVY
VSSRNHGFDAWTFIRNLPPQSIRQLHLAGHMDYGDYVVDTHDHPVCDPVWALYEQTLEHL
GPVSTLLERDDHFPPFEDLLTELSKARELGAMALARRTLCA