Protein Info for PFLU_RS26140 in Pseudomonas fluorescens SBW25-INTG

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 607 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to pfs:PFLU5319)

Predicted SEED Role

"FIG00960839: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See C3K2C2 at UniProt or InterPro

Protein Sequence (607 amino acids)

>PFLU_RS26140 hypothetical protein (Pseudomonas fluorescens SBW25-INTG)
MMDVRSPLASIGLCAALLLAGGCSPSDEQKQATLEEKTAKFEQSLDSIQDPKLRDAIADL
GGSLLLLERAQAKLATKPIEAEYGEDSLALLKHYPTPQALVDTYINGLFVLRKTSHSDYL
TDLQPVFPFTFNTSDQFPFPHGLEWQSVTLSNNKVIPFQPEWSETDPGIQLSPSSSNLTN
PDDLTVTYPFIDGIETENKSQPQPVNLKGTVEVIAPGKVLTFDLSKKDVGHTRTEGNITL
KLLLLEKNYAEIELTNSQALAPEVGDESPNPLLVQARDSTGQFLTRSGSINESSAQVAFY
EKQLAEMQKQKAWSEAFEKQLTDEQKAFEHKQSSHYAKVYFNGVIDNLQVNVLDFSTATR
TRKDLDLPVLRFDKNSLQQTVQALPMPVTVYDDGAASWLKDASMTEEQLKNSVTISQSAE
DASAAHIVFDHPFTFNDDLVGSERNSSESPVTFFTADEKGERGEPIELPTEAFELNPARG
TLTYDLNLFPENPAYVVGSIPLFLATIEKAEIDVAKLPKGLSLKDNALVVDQKEFPADSW
RFYAKDASGNYLKEILGVSHRAEEYGTAMFDVHYFYGQPTTLESYQRTDLSTVQYGFEVK
LDKPESK