Protein Info for PFLU_RS15620 in Pseudomonas fluorescens SBW25-INTG

Annotation: phenylacetaldoxime dehydratase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 352 PF13816: Dehydratase_hem" amino acids 44 to 343 (300 residues), 312.6 bits, see alignment E=3.1e-97

Best Hits

KEGG orthology group: K13028, aldoxime dehydratase [EC: 4.99.1.5] (inferred from 100% identity to pfs:PFLU3206)

MetaCyc: 91% identical to aldoxime dehydratase monomer (Pseudomonas chlororaphis B23)
4.2.1.-

Predicted SEED Role

"Aldoxime dehydratase"

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.99.1.5

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See C3KC36 at UniProt or InterPro

Protein Sequence (352 amino acids)

>PFLU_RS15620 phenylacetaldoxime dehydratase family protein (Pseudomonas fluorescens SBW25-INTG)
MESAIDTHLKCPRTLSRRVPDEYQPPFPMWVARADEQLEQVVMAYLGVQYRGDAQREPAL
QAMRHIVGSFSLADGPQTYDLTHHTDSSGFDNLIVVGYWKDPAAHCRWLRSPQVNDWWSS
PDRLGEGLGYFREITAPRTEQFETLYAFQENLPGVGAVMDTTSGEIEEHGYWGSMRDRFP
ISQTDWMKPTSELQVIAGDPAQGGRVLVLGHDNLTLIRSGQDWADAEAEERSLYLDEILP
TLQDGMDFLRDNGQPLGCYSNRFVRNIDLDGNFLDLSYNIGHWRSVEKLERWAESHPTHL
RIFVTFFRVAAGLKKLRLYHEVSVSDAKSQVFEYISCHPQTGMLRDALPPTT