Protein Info for PFLU_RS14655 in Pseudomonas fluorescens SBW25-INTG

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 394 transmembrane" amino acids 21 to 44 (24 residues), see Phobius details amino acids 60 to 79 (20 residues), see Phobius details amino acids 86 to 105 (20 residues), see Phobius details amino acids 112 to 134 (23 residues), see Phobius details amino acids 143 to 162 (20 residues), see Phobius details amino acids 168 to 188 (21 residues), see Phobius details amino acids 213 to 239 (27 residues), see Phobius details amino acids 251 to 269 (19 residues), see Phobius details amino acids 277 to 296 (20 residues), see Phobius details amino acids 302 to 324 (23 residues), see Phobius details amino acids 336 to 356 (21 residues), see Phobius details amino acids 362 to 382 (21 residues), see Phobius details PF07690: MFS_1" amino acids 37 to 326 (290 residues), 50.8 bits, see alignment E=6.1e-18

Best Hits

KEGG orthology group: None (inferred from 100% identity to pfs:PFLU3006)

Predicted SEED Role

"Permeases of the major facilitator superfamily"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See C3KA97 at UniProt or InterPro

Protein Sequence (394 amino acids)

>PFLU_RS14655 MFS transporter (Pseudomonas fluorescens SBW25-INTG)
MHTHSHATQDRPRPASVSWNLLAAIVLFAAITPTILMTAPAVAAQLGAQWQLSPSQIGDL
FSVELGAMSLATLPALWWLRRVNWRLAALAAAGLFIAANLLSMLADSYTHLLTLRFASAL
AGGSLMIICLASAATTANPSRVYGLWVMGQLVVGAIGLAVLPGLFERYGLGACYLILAGL
MTLLLPLARSFPNAAPAPQTAETARVSGSRWHAALGVGAVLAFYISLGGVWTFIGALGAR
VGISPQDSGEVLAVATVMGIAGAACASLIGPRLSRLRLLLAGYALMAAAVLLLLGQPTLM
RFALAALLFKFTWTFILPLILACLADLDHSGKLMNASNLVIGGGLAIGPAIAGRLIEVSG
SFTALLIGGAVITLLSLAMILASRPKPVVEMEPV