Protein Info for PFLU_RS11665 in Pseudomonas fluorescens SBW25-INTG
Annotation: galactose mutarotase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 45% identical to GALM_ACICA: Aldose 1-epimerase (mro) from Acinetobacter calcoaceticus
KEGG orthology group: K01785, aldose 1-epimerase [EC: 5.1.3.3] (inferred from 100% identity to pfs:PFLU2375)MetaCyc: 45% identical to mutarotase (Acinetobacter calcoaceticus)
Aldose 1-epimerase. [EC: 5.1.3.3]
Predicted SEED Role
"L-arabinose-specific 1-epimerase (mutarotase)" in subsystem L-Arabinose utilization
MetaCyc Pathways
- trehalose degradation VI (periplasmic) (1/2 steps found)
- D-galactose degradation I (Leloir pathway) (3/5 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 5.1.3.3
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See C3K973 at UniProt or InterPro
Protein Sequence (382 amino acids)
>PFLU_RS11665 galactose mutarotase (Pseudomonas fluorescens SBW25-INTG) MKHPRYLLSGLAMSLLIASGGAQAAGLTSEHKPFGKTNDGTAVEQYILRNSHGMQATVIT YGGVLQSLKVPDKNGKVDDVVLGFDDVQGYQAGTAFFGATIGRFGNRLAGGAFELDGKRY QVPLNDGPNSLHGGAQGFDKHVWKASPVKSKDSVGVTLTYLSKDGEMGFPGNLKTEVTYR LNDKNELHIDYKATTDKPTVLNLTNHSYFNLAGAGNGDILKQVATLHASHYTPVNATLIP TGELAPVKGTPMDFLKPTPIGQHIKEDHPQLKFAEPKQGGFDFNWALDTKGDVKQLAAEV HDPESGRRLQLYTSEPGVQFYTSNFLDGSVKGKAGKTYLHWSGFTLETQHFPDAPNQPTF ASTRLNPGQTYTQSTVFKFSAN