Protein Info for PFLU_RS09915 in Pseudomonas fluorescens SBW25-INTG

Annotation: M81 family metallopeptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 514 PF07364: DUF1485" amino acids 10 to 295 (286 residues), 312.7 bits, see alignment E=2.4e-97 PF07171: MlrC_C" amino acids 309 to 486 (178 residues), 186 bits, see alignment E=7.9e-59

Best Hits

KEGG orthology group: None (inferred from 100% identity to pfs:PFLU2016)

Predicted SEED Role

"MlrC"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See C3K8A1 at UniProt or InterPro

Protein Sequence (514 amino acids)

>PFLU_RS09915 M81 family metallopeptidase (Pseudomonas fluorescens SBW25-INTG)
MTTSAAEPKKVLVAGFQHETNTFAPSKAAFLNFERGEGHPALPRGEEFLALRDVNIPAGG
FIKSAEERGWTVIPVVWAGASPSAHVTEDAFERIANEILEAVSLGGFDAVYLDLHGAMVT
EHFDDGEGELLARIRKVVGACIPVVASLDLHANVTEQMLESANALVAFRTYPHVDMAETG
ERCADLLEKLFSKAECDLTVCRLPFLIPINSMCTLLDPAKSMYERVAHYESGQVHSVSFA
AGFPAADFCECGPVIWGYGRQASSAVEALYAEMLMNEAHWQVPFMEPEEAVLEAMRILDV
GGGDGPVVIADTQDNPGAGADSNTAGMLRALISAGAKNAAIGLMYEPDIAMQAHQAGVGA
KLELSFGGKSGVQGDDALTGLFEVVSLSDGACRYDGPMKHGMIAQLGPVAALRIGEITVV
VSSTKAQMLERNLYRIAGVQPESMDILVNKSSVHFRADFQGIARAVLVAKAPGPMLADPA
DLPWKNLKPGMRLKPCGPEFVPSILKTRLTCALE