Protein Info for PFLU_RS05480 in Pseudomonas fluorescens SBW25-INTG
Annotation: hypothetical protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: None (inferred from 100% identity to pfs:PFLU1104)Predicted SEED Role
No annotation
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See C3K857 at UniProt or InterPro
Protein Sequence (2170 amino acids)
>PFLU_RS05480 hypothetical protein (Pseudomonas fluorescens SBW25-INTG) MPTHQLLNGLSGNLQSSTAWARQQSLELIQHTVAQAMQGLTPPEQTRYLKLQREALAAVN AVEAEKNRLIQAFKVEGLAELREKIGGRDPENYRLYTTYLEKREQPFPWEPRVTEPPYRP RRALDEWQYIEHTKSMTLWEAACLNFGFTSSIIQASGYSLAEASEIIGGNDDRSLPVKDF IAVARKLNLGGRLRALINPTLSSDGTLRNLIKASSKALLLFDLLDAWRNRAVTGLTRPMY DTLHAALNGDGPQPAFDMLSLTSSRTPILPKPHTAWHTAMPIPLLLINVASLGVLSYFPF RPGGALRYHVDAQAAENAWREQLNTSHQQQDLGWFSRQLPLIGLATFKSLLRQEPRPKDM NWLTGLLYDGFHKAFPQRTLDSVRFSTAMRPDRPLTLVEAFTHQQIQRFQADLDTLATPR SEADWQALTDAVAAIAGEVLQLLLTPLPGGVTGLNRMMQLAVMGSLTYSVGQGLSEAIQG DASGFASAMADVADLAVSGRLISTAGRLHRQRMLGYLNRLGNPRKVTRPDGVEALWKPDA QPYAVANQALLNGKTADALGVFSVKGKRYVKLRHDDQALVVEVRHDSQSMRYVLKHANAD TYNPPIIFEPAWQAWKFDLHNAHTLSDIKLLQRMLPNGSSHAPVADLEHMLKSTATPRAT LDRVWAGHSAPLNLIEGVRRLQADRVIQQIIDHFDQPGYMPPHGDSTVFCLLTQLAGWPV EALLSIREEAGEVIEIYSKPEHAPTKPHLISLTRREDGSYLATNGQRVSPGSADTLLLLI LQLQPSGSTLGQETRHNRSPDQRVVAIREQVVALARQERMTLFSAVVDFSGYEKGERLPP ADVRRFLPFMASPPLVAVTPLLKKMRDLNRPLSPAHLEQLLTANPLTPRQHQAFLDAGTL PTAFAEWLDHHRTALRIDAAIDGLYHPRAHNDDIDQWAREFASALVRNTLKRPFVITEVV AGDIATPYLSSSSDDPTVELRHYGRGRYEAYDLRNGGTIPVSPDNESFYLAIGSVLQPHE RQLLGMNSASDSQGLRTTLGDYMSNQRNTEGFVSLVNGSLVQYEQRLDLPPDLAPTANGI FVLDGRHYLPLLDALYRIAFDKKRLKWRLHHPTKIGVDTPTLEHNGEGTWRLSSENPMTW DDHRLLYRLGNHAYAFTREMAAKILALTDTSAPLLRQVHRNGRAVPPLLADTCKRLKIEQ EIHRFIEAMRAEPTSRSAQPHLQMLVISSLPDWPSSHVLQIVDRQNRVLQQYPVSQAPDA QAVKVTEHDYKDAKLLEVLSQNDAITQGLLGELPASHDERLFKLVKKIVEFAQREKADIF NSLYAQSETTGNLRDKRFKAKFPELPTPLVKAILEHASPRELRQLRDKHQVSLRLAEQVR LSSHDLRLNRAYEGLYLSAWTHPDSDKITLHLLKSLPTWPKGLRIDIHEGDSRGRLLESA GHLDGSVRRVLARTQRGYQGYAADGAHLGAPSPALLDVIVKTLSDSEKAALGVVGEPGIA DLREQIAALALERRVEIKRLLDLPHVQPWMVPPLGVNRTFLAYPLWSELWPFGGNRPPDL MSRVQQVYPRFSNDDARRFIRSLNLSEPAALIELDRRQAEIQALPTELQRWSDATYSQDD SLESDSDRDSDRQSWSNLTTRRALALRLCEAARRENPQRFIFGLFHLSSLTLQLDAINTL PTLSIDSRTFEHIEYLHLAGDIFPVQGDAFLRYFSQLRALKIDCDLNELPSAISDMAHLT HLDLADNRIVLTATSAERLSRLVNLRELNVSDNPLGVVPDFAALTALQTLNLRNTGLTQW PHSAWALPNLSLLHLEENHITTLPESLFSSPQALERQRRTLLHDNPLTLETRQRLARYSA ETRVNLRGARPGIVHLPGPSKDFNNWLSGVHANKHESLRFLWDALREHEGASPDDTFRVL RDLTQSYDYRQGGRIRAGLTQRVWTLLIAMGNSNHLCETIFLNTYAAGTCGDGAILTFSN MELMHRAHQAKSQQGSHQVDKDLLVLAQGSYLIEQLDQFSEDLIARLETPEEPLDAAEVT LFFRVRLTEEFSLPVHPEQMLYAIDERVTEQHVQEARDHLNALRSTPALQDSILEREFWI EYLALSYPEPFLTVRDASKLKQQELDQQVQNKRSDEYLERRQSLIEREKLEQYRLVRQLT EAAQLAQRVH