Protein Info for PFLU_RS04925 in Pseudomonas fluorescens SBW25-INTG

Annotation: polysaccharide deacetylase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF01522: Polysacc_deac_1
  • amino acids 178 to 303 (126 residues), 43.1 bits, E=1.9e-15

Best Hits

KEGG orthology group: None (inferred from 100% identity to pfs:PFLU0993)

Predicted SEED Role

"Uricase (urate oxidase) (EC 1.7.3.3)" (EC 1.7.3.3)

MetaCyc Pathways

• superpathway of purines degradation in plants (14/18 steps found)
• ureide biosynthesis (6/7 steps found)
• urate conversion to allantoin I (2/3 steps found)

KEGG Metabolic Maps

• Caffeine metabolism
• Purine metabolism

Isozymes

Compare fitness of predicted isozymes for: 1.7.3.3

Use Curated BLAST to search for 1.7.3.3

Sequence Analysis Tools

See C3KEA3 at UniProt or InterPro

Protein Sequence (374 amino acids)

>PFLU_RS04925 polysaccharide deacetylase family protein (Pseudomonas fluorescens SBW25-INTG)
MRIALLLSACLLCLNAQAAPVDVASLDRGTWPEKLSSPALFDVASRAEILMFAHSLLASE
RQDEAALKQRLGLKIINMAAIDDLRRQLWQRLLENYTFAQQSCEVDASFCYLVENMDDLL
EQAGKFEVSEDSFYIGWANPSHVFHERYLDELLRKAALFPQISSEVALFGDHERNGNEFN
DRLFLLTFDGGPAPVSGNTDWLTDYLRKQKMNATFFALGSSLQNRVERSSVADVEALYQG
QCVGTQGWQYRSHSHWVDWQSSITRSASLAQNLMPENYVPLFRPPYGQRRADSQGFFQAQ
GLQVALWDIDSQDEPGKLKADESAQRVLTLMLLWRKGVIVFHDTQDKARVALPILLQATA
QSGLGWQDCREAFR