Protein Info for PFLU_RS03775 in Pseudomonas fluorescens SBW25-INTG

Annotation: acyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 299 transmembrane" amino acids 12 to 35 (24 residues), see Phobius details amino acids 120 to 138 (19 residues), see Phobius details PF01553: Acyltransferase" amino acids 74 to 211 (138 residues), 60.9 bits, see alignment E=5.7e-21

Best Hits

KEGG orthology group: None (inferred from 100% identity to pfs:PFLU0762)

Predicted SEED Role

"FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See C3KDP3 at UniProt or InterPro

Protein Sequence (299 amino acids)

>PFLU_RS03775 acyltransferase (Pseudomonas fluorescens SBW25-INTG)
MLDFLPAAVRGVIASLLLALNTILLCSFLFIVALFKALPFAKRFSEWLMNHTHEAWVTNN
KGWMNLVRRTRWHLTGLEGLDYQHSYLVTSNHQSWVDIMVLQYVLNRRIRPLKFFLKQEL
IWVPVIGLAWWALGFPFMKRYTKAYLEKHPEKKGKDLETTRKTCAKFRDNPVGIFNFAEG
TRFTPGKHAQQSSPFRYLLKPKAGGIAFVLDAMGEQLKSLVNVTIHYPAGRPGYWDLLCG
NVKDVVVQFEEVQIPAEFIGKNYEQDGEYRLAFQGWINRLWEDKDQLLEKLHTEFPGKR