Protein Info for PFLU_RS00280 in Pseudomonas fluorescens SBW25-INTG

Annotation: SulP family inorganic anion transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 515 transmembrane" amino acids 14 to 35 (22 residues), see Phobius details amino acids 42 to 62 (21 residues), see Phobius details amino acids 82 to 103 (22 residues), see Phobius details amino acids 115 to 135 (21 residues), see Phobius details amino acids 167 to 185 (19 residues), see Phobius details amino acids 195 to 216 (22 residues), see Phobius details amino acids 246 to 268 (23 residues), see Phobius details amino acids 288 to 307 (20 residues), see Phobius details amino acids 327 to 356 (30 residues), see Phobius details amino acids 377 to 404 (28 residues), see Phobius details PF00916: Sulfate_transp" amino acids 13 to 382 (370 residues), 208.8 bits, see alignment E=5.6e-66

Best Hits

KEGG orthology group: None (inferred from 100% identity to pfs:PFLU0056)

Predicted SEED Role

"Sulfate transporter family protein in cluster with carbonic anhydrase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See C3K5T6 at UniProt or InterPro

Protein Sequence (515 amino acids)

>PFLU_RS00280 SulP family inorganic anion transporter (Pseudomonas fluorescens SBW25-INTG)
MRAAQLKAVIPRELLASVVVFLVALPLCMGIAIASGMPPAKGLITGIIGGLVVGWLAGSP
LQVSGPAAGLAVLVFELVRQHGMMMLGPILLLAGFLQLVAGRLRLGCWFRVTAPAVVYGM
LAGIGVLIVLSQIHVMLDGAPKPSGLDNLAGFPAALAEAIPTLGGGLGWQAGLLGLSTML
VMYVWDKFRPQKLRFVPGALLGVGLTTVVSLVLALQVKRVEVPENLADAIDWLRPSDLLN
LADPQLLIAAFAVAFIASAETLLSAAAVDRMHSGQRSDFDKELSAQGVGNMLCGLVGALP
MTGVIVRSSANVQAGATTRLSAMFHGVWLLGFVLLLSSVLQSIPVASLAGVLVYTGIKLV
DIKAFKALGRYGRMPMFTYAATALAIIFTDLLTGVLVGFGLTLVKLALKASRLKVSLIDL
PQDGEMELRLIGAATFLKVPALTQVLSTVPAGSTVHVPLNNLSYIDHSCLELLEEWGRAN
AAKGSRLVIEARGLKRRLEGRVRTTTGIGSAASTG