Protein Info for MPMX20_04622 in Enterobacter sp. TBS_079

Annotation: Protein ViaA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 483 PF05762: VWA_CoxE" amino acids 319 to 457 (139 residues), 38.8 bits, see alignment E=7e-14 PF13519: VWA_2" amino acids 323 to 422 (100 residues), 32.5 bits, see alignment E=1.1e-11

Best Hits

Swiss-Prot: 91% identical to VIAA_ENT38: Protein ViaA (viaA) from Enterobacter sp. (strain 638)

KEGG orthology group: None (inferred from 97% identity to enc:ECL_05136)

Predicted SEED Role

"FIG00626290: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (483 amino acids)

>MPMX20_04622 Protein ViaA (Enterobacter sp. TBS_079)
MLTLDTLNVMLAVSEEGLIEEVVITLLASPQLAAFFEKFPRLKKAMTDDLPRWRENLRQR
FKETEVPPELTDEVACYQQCQRLSTSQFIAQLPQTLTLLDTVHSPFASQARALVTDNATF
TPALHTLFLQHWRLSLVVQATTLNQQLLDEEREQLLSEVQERMTLSGQLEQVLVENENAA
GRLWDMSAGQLRRGDYQLIVKYGDFLAQQPELMKLAEQLGRSREAKSVPKKDAPMETFRT
LVREPATVPEQVDGLQQSDDILRLLPTELSTLGMTELEYEFYRRLVEKQLLTYRLHGEAW
REKLSQRPVIHQDFDEQPRGPFIVCVDTSGSMGGFNEQCAKAFCLALMRVALADRRRCFI
MLFSSEVVGYELTHQQGIEQAIRFLSQRFRGGTDLASCFRSIVERMQGGDWYDADAVVIS
DFIAQRLPDDVVNKVKELQRVHQHRFHAVAMSAHGKPGIMRIFDHIWRFDTGLRSRLLRR
WQR