Protein Info for MPMX20_04528 in Enterobacter sp. TBS_079

Annotation: Catalase-peroxidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 726 TIGR00198: catalase/peroxidase HPI" amino acids 18 to 725 (708 residues), 1311.2 bits, see alignment E=0 PF00141: peroxidase" amino acids 92 to 396 (305 residues), 140.5 bits, see alignment E=4e-45 amino acids 403 to 699 (297 residues), 91.7 bits, see alignment E=3.3e-30

Best Hits

Swiss-Prot: 92% identical to KATG_ENT38: Catalase-peroxidase (katG) from Enterobacter sp. (strain 638)

KEGG orthology group: K03782, catalase/peroxidase [EC: 1.11.1.6 1.11.1.7] (inferred from 96% identity to enc:ECL_05036)

MetaCyc: 87% identical to catalase/hydroperoxidase HPI (Escherichia coli K-12 substr. MG1655)
Catalase. [EC: 1.11.1.21, 1.11.1.6]; 1.11.1.21 [EC: 1.11.1.21, 1.11.1.6]

Predicted SEED Role

"Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7)" in subsystem Oxidative stress or Photorespiration (oxidative C2 cycle) or Auxin degradation (EC 1.11.1.6, EC 1.11.1.7)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.11.1.6

Use Curated BLAST to search for 1.11.1.21 or 1.11.1.6 or 1.11.1.7

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (726 amino acids)

>MPMX20_04528 Catalase-peroxidase (Enterobacter sp. TBS_079)
MSTSDDSNNAASIGKCPFHQGSVDHSAGAGTGSRDWWPKQLRVDLLNQHSNRSNPLGEDF
DYRKEFSKLDYSALKGDLKALLTDSQPWWPADWGSYAGLFIRMAWHGAGTYRSVDGRGGA
GRGQQRFAPLNAWPDNVSLDKARRLLWPIKQKYGQKISWADLFILAGNVALENSGFRTFG
FGAGREDVWEPDMDVNWGDEKAWLTHRDPEALAKRPLAATEMGLIYVNPEGPNASGEPLS
AAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAGEATHVGADPEAAPIEAQGLGWTST
HGTGVGADAITSGLEVIWSQTPTQWSNYFFENLFKYEWVQTRSPAGAIQFEAVDAPDIMP
DPFDPSKKRKPTMLVTDLTLRFDPEFEKISRRFLNDPQAFNEAFARAWFKLTHRDMGPKA
RYIGPEVPKEDLIWQDPLPQAVFNPTKEDIESLKAEIIASGLSVSDLVSVAWASASTFRG
GDKRGGANGARLALAPQRDWEVNAAAVRALPALEAIQRTTNKASLADIIVLAGVVGVEQA
AKEAGVYVNVPFTPGRVDARQDQTDIEMFNLLEPIADGFRNYRAQVDASTTESLLIDKAQ
QLTLTAPELTVLIGGLRVLGANFDGSQNGVFTHREGVLSNDFFVNLLDMNTQWKATDESN
ELFAGSDRASGEVKYTATRADLVFGSNAVLRALAEVYASSDAHEKFVRDFVAAWAKVMDL
DRFDLQ